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MGLTools Segmentation Fault

I'm currently working as an intern for computational chemistry. One of the applications that we need is MGLTools which I installed using this website: https://bioconda.github.io/recipes/mgltools/...
Jacob Isaac Delfin's user avatar
0 votes
1 answer
48 views

Problem in executing terminal commands

Command 'sed' is available in the following places * /bin/sed * /usr/bin/sed The command could not be located because '/usr/bin:/bin' is not included in the PATH environment variable. sed: command ...
arnab samanta's user avatar
0 votes
1 answer
86 views

Help repairing broken Python base on Linux with Miniedit-WiFi setup

I previously uninstalled Python3.12 (on which I had ran Miniedit-WiFi tool) and left the default Python3.11; however the following console-log error keeps popping out whenever I run a Python script on ...
Kayemba Luwaga's user avatar
1 vote
2 answers
171 views

Where can I add to the ***universal*** path?

I'm a script kiddie of sorts and enjoy writing bash scripts for things, and I keep them in a repository that I synchronize, and on my personal computers I keep it in a home/otherStuff/customBin folder,...
Jrome's user avatar
  • 13
-1 votes
2 answers
460 views

Accidentally changed PATH variable and I cant change it back, or use vim etc..help

I know there are many questions like this, but I unfortunately dont know enough about Ubuntu to be able to apply it to my situation. I have all my stuff saved for work on a remote machine, that i ...
Learn4life's user avatar
0 votes
2 answers
81 views

Adding simple shortcut on the terminal, the right way

I am trying to add folder to PATH variable (for specific user only). so to ~/.bashrc i have added export PATH=$PATH:/home/username/Tools/scripts/ within this folder i am having scripts and some ...
TeslaS's user avatar
  • 11
1 vote
1 answer
331 views

Terminal is neither showing path nor working

The default terminal and the VS code Terminal are neither showing path nor working. I have updated the system, cleared the cache, reinstalled the terminal, installed the new other terminals, and saw ...
Sreyapashikanti's user avatar
-1 votes
1 answer
71 views

ns3 installation error

NS3_MODULE_PATH = ['/usr/local/sbin', '/usr/local/bin', '/usr/sbin', '/usr/bin', '/sbin', '/bin', '/usr/games', '/usr/local/games', '/usr/lib/wsl/lib', '/mnt/c/Program Files/Common Files/Oracle/Java/...
Ayaan's user avatar
  • 13
4 votes
2 answers
2k views

How to create an alias for a "cat" file usable in a path

I have two huge files (150G each) and I need to use a tool for which I should supply them as a single file (since the tool only accepts one file). However, I do not want to merge these files for ...
ashenflower's user avatar
0 votes
1 answer
540 views

How do I use sudo on a script I made myself that is already in my path and executable?

How do I make a script that I made myself that I already put in my path and made executable usable with sudo? (Xubuntu 22.04.1.) The script is located here: ~/bin/myScript. When, from an arbitrary ...
Brōtsyorfuzthrāx's user avatar
-2 votes
2 answers
502 views

In concatenating two variables, the system expands the resulting path and returns unexpected results. How do I prevent this?

Question 2.0: Given the code: SSLPasswordFilePath="$SSLFilesDir$SSLPasswordFile" When I run: "$SSLPasswordFilePath" I get this unexpected result: /tmp/ConfigFiles/SSL/Password....
LeviRCoding's user avatar
0 votes
1 answer
439 views

How to add browser cutable path in ubuntu

just trying out ubuntu, and installed a node/npm CLI application where we can run the command in the terminal. That command/tool requires us to specify the browser e cutable path every time when we ...
data 's user avatar
1 vote
2 answers
635 views

Ubuntu CLI, replace a long filepath/filename with a shortcut

I have a long path to some of my files and I don't want to type and/or use the Tab-key as much when using it with commands in the Terminal. So I want to add "shortcuts" to some of them (both ...
Ola Ström's user avatar
4 votes
1 answer
5k views

"/usr/bin/python: No module named virtualenvwrapper" error when opening terminal

I'm using Ubuntu 20.04 (clean installation, I did not upgrade from a previous one) and when I open a new terminal (simply by Ctrl+Alt+T), it always starts with the output shown below (also shown in ...
Daniel125's user avatar
-1 votes
1 answer
2k views

deleted a folder from root(user), ubuntu how do i access the trash bin from terminal?

i have deleted a folder from the root user dir (same where var,usr,home,etc,lib is stored) using the Webmin browser GUI ...on url http:// IP :10000 VPS: ubuntu 18.04 User : root no GUI, only SSH and ...
Harsh Jadon's user avatar
0 votes
1 answer
13k views

How to change python3 path pointer?

I am using Ubuntu 20.04.2 LTS with python version 3.9.5 installed. When I type which python in the terminal, it shows /usr/bin/python which is the default path for python2 (2.7 in my case). But when I ...
atanughosh01's user avatar
1 vote
1 answer
3k views

Export PATH does not work after restart

I am new to this. I installed drush and did export PATH=$PATH:~/.config/composer/vendor/drush/drush So that I can execute drush from the command line with the drush command My issue is that I have to ...
ventura's user avatar
  • 23
0 votes
1 answer
97 views

Can't Log In After Adding To Path

I was trying to add Jupyter Notebooks to the permanent path in linux. I followed these steps: Open a terminal window using Ctrl+Alt+T Run the command gedit ~/.profile Add the line export PATH="$...
Luke Monington's user avatar
-5 votes
1 answer
703 views

how to write a command to remove a folder, name includes spaces.? [duplicate]

How can I delete a folder with whitespace in its name, but without quoting the folder name? I also need to be prompted to confirm the deletion. I know how to do it like this: rm -ri /home/user/'my ...
Jay B's user avatar
  • 23
0 votes
2 answers
280 views

Find the list of immediate next directory from the given location for reaching a destination file?

We can find the full absolute path of a destination file using find keyword. In my case, I need the list of all immediate next directory to my given location which can lead me to my program log file ...
Aadil Hoda's user avatar
1 vote
1 answer
1k views

A path set in /etc/profile/ doesn't appear on other users' environment

I have the following PATH variable in /etc/profile. The last line should allow me to use the conda command for any user. # /etc/profile: system-wide .profile file for the Bourne shell (sh(1)) # and ...
Maxen_ce's user avatar
2 votes
1 answer
2k views

Start intellij from anywhere

I have recently installed Ubuntu and I'm a bit confused. I have downloaded VSCode and I can simply start it from my terminal using code. I downloaded intellij and tried idea and intellij but none of ...
Manas Prakash's user avatar
0 votes
1 answer
904 views

tmux errors running bash commands due to path

When I run $tmux and open an instance of a tmux session and try to run a command such as ls I receive the following error: ∆ ls Command 'ls' is available in the following places * /bin/ls * /usr/bin/...
Kevin Crum's user avatar
4 votes
1 answer
5k views

How to run scripts that are in PATH?

I'm pretty much completely new to Ubuntu, so bear with me. I have made a few scrips without the .sh extension and granted them permission with chmod 755, and the scripts run just fine as long as I'm ...
SweGoat's user avatar
  • 43
0 votes
2 answers
329 views

After installing python3.7, virtualenv and pip on newly installed 20.04, terminal window will not open

I needed to install python3.7, virtualenv, and pip. After doing so, I added ~/.local/bin to $PATH. I echo'd $PATH and saw that it added .local/bin and then closed the terminal app. Terminal will no ...
cgaters's user avatar
0 votes
1 answer
54 views

Trouble starting MATLAB via Alt+F2

I've recently installed MATLAB to /opt/matlab/R2016a and I've managed to give myself the privilidges to run it. Next I wanted to be able to run it from a terminal and or the Alt+F2 "quick command line"...
KeriBoti's user avatar
2 votes
1 answer
516 views

After installing binary to another directory, error "No such file or directory"

After uninstalling a program with apt and reinstalling it in another location (ex. pypy with snap), running the program from command line reports bash: /usr/bin/pypy: No such file or directory, but ...
qwr's user avatar
  • 2,852
0 votes
0 answers
161 views

My installation path is different with the documentation path, why?

Recently I'm installing OpenVino from scratch following this documentation : Install Intel® Distribution of OpenVINO™ toolkit for Linux* . Now after several steps, I realized that the output path ...
raisa_'s user avatar
  • 351
0 votes
1 answer
6k views

How to permanently change a PATH variable in Debian [closed]

I'm trying to change the directory that is accessed when I call blender in my terminal. This is currently where it is: ...$ which blender /usr/bin/blender And I'd like to instead use the version ...
Otherness's user avatar
  • 113
25 votes
1 answer
9k views

Why isn't tilde recognised as home folder in this case?

This doesn't work: $ ls "~/.wine/drive_c/tools/Family Tree v2.0" ls: cannot access '~/.wine/drive_c/tools/Family Tree v2.0': No such file or directory But this does: $ ls "/home/daniel/.wine/...
Gigi's user avatar
  • 681
1 vote
1 answer
750 views

Can't append to PATH in ~./bashrc using $Home

I just want to add a path in ~/.bashrc as: export PATH="$Home/gg/gamit/bin:$Home/gg/kf/bin:$Home/gg/com:$PATH" But when I am using echo $PATH is showing it as: /gg/gamit/bin:/gg/kf/bin:/gg/com:/...
sandeep gupta's user avatar
1 vote
1 answer
2k views

How to add a directory to PATH in Linux ? I am using Windows Subsystem for Linux - Ubuntu [duplicate]

I am new at Linux and I am facing a problem. I am trying to add the bin directory to the PATH in the Linux executing the command below: $ export PATH="/opt/gcc-arm/bin:$PATH" However, when I try to ...
Geisterfahrer's user avatar
1 vote
3 answers
12k views

How to run an executable file from a different directory without cd or modifying the PATH?

Variations similar to what I want to ask exist but I could not find the exact question, so I'll ask it here. Let's say I have a comiled .c file resulting in the executable ex which is located as /mnt/...
NotNotLogic's user avatar
-1 votes
1 answer
3k views

Command not found error after trying to install mgltools on WSL

I am working on Ubuntu windows application. I want to use a tool and I have downloaded the file and install it is in /usr/local/bin. I want to access the tool from anywhere and for that I have write ...
Rhea's user avatar
  • 571
0 votes
1 answer
17k views

My $PATH variable is messed up. How to change it back?

Whenever I try basic commands in the terminal like sudo or ls, I get this error: Command 'sudo' is available in '/usr/bin/sudo' The command could not be located because '/usr/bin' is not included ...
R. Siva's user avatar
1 vote
1 answer
2k views

I've installed lsd in Ubuntu 19.04. But when I run lsd command, it shows command not found

Command 'lsd' is available in '/snap/bin/lsd' The command could not be located because '/snap/bin' is not included in the PATH environment variable. lsd: command not found How can I solve this ...
Sahil Ansari's user avatar
0 votes
2 answers
724 views

can relative path access more than one level?

I'm new to Linux and was wondering if relative path can access more than one level. For example: /home/john/Desktop/Myfiles/text.txt If i'm currently at ~/ can i jump to text.txt without having to ...
Anhtu's user avatar
  • 1
1 vote
1 answer
2k views

Pass/set `current directory` to/for a shell script from Java in Ubuntu 16.04

While trying to automate an installation process in Ubuntu 16.04 with a .jar file, I did not know how to solve the following problem: Problem description Part of the installation files automatically ...
a.t.'s user avatar
  • 337
0 votes
1 answer
1k views

How to set, permanently, my own directory instead of /home/bin in $PATH in ubuntu? [duplicate]

This might be a repeated question, but I couldn't relate to any previous answer. I basically want to run my shell-script from anywhere in ubuntu 16.04 (whether I'm inside the directory where the shell-...
McLan's user avatar
  • 251
10 votes
5 answers
11k views

Why doesn’t `mv file /dir` move the file to a subdirectory of the current working directory?

I was in my /etc directory and typed the command me@mylaptop:/etc$ sudo mv MyFile.conf /openvpn I thought that would move the file into the directory openvpn which is a subdirectory of the /etc ...
whitelightning's user avatar
2 votes
1 answer
958 views

Shebang line for Node does not work in Ubuntu 18

I have just created an Ubuntu 18.04 instance on AWS and copied an existing project over. The usual shebang line for Node #!/usr/bin/env node now doesn't work. It gave: #!/usr/bin/env: No such file ...
Old Geezer's user avatar
0 votes
0 answers
84 views

Zimbalaka: What is the full path to directory in celeryd.conf?

I am trying to install and run Zimbalaka (a Zim file creator for Offline MediaWiki in an app like Kiwix) in an Ubuntu Desktop 18.10. At a certain point, instructions tell to modify a line to contain ...
pdeli's user avatar
  • 111
1 vote
1 answer
107 views

How to COPY a directory location? [duplicate]

I've been struggling with this since I've installed Ubuntu: How do I copy a directory location? For example: /home/user/downloads/game/game.sh Do I have to type every single letter on terminal? ...
Daniel Lus's user avatar
1 vote
1 answer
1k views

'sudo' is not available (command is not in the PATH)

Okay. I don't just copy-paste commands from the net, and I didn't see how/why that one would mess things up, but here.... I wanted to configure webstorm for dev. So I followed these instructions: $ ...
LogicOnAbstractions's user avatar
1 vote
0 answers
310 views

IRSTLM path environment variable

I am trying to get IRSTLM to work. I have set the pah using: PATH=:/usr/local/lib/irstlm:$IRSTLM And then when I am tyring to run the build-lm.sh function it is telling me that it is located in /usr/...
zefzhrtyts's user avatar
4 votes
2 answers
5k views

How to get the real path of a sh file that is being sourced

I added this line into my ~/.bashrc . /mnt/c/Users/enzo/drive/projects/dotfiles/init.sh And and inside of init.sh I am trying to get the path of init.sh but I am not able to. I tried this so far: ...
Enzo's user avatar
  • 143
3 votes
2 answers
8k views

App installed in directory on the PATH, but not found. Weird /snap/bin - error message

I have the app minikube in /usr/local/bin/minikube. When I do minikube version with the whole path, I get: $ /usr/local/bin/minikube version minikube version: v0.28.2 When I do minikube version ...
ElToro1966's user avatar
-1 votes
1 answer
1k views

How do i specify a file location in terminal?

Running the following commands: wine /Home/Downloads/steamsetup.exe wine Username/Home/downloads/steamsetup.exe resulted in file not found. How do I specify a file location in terminal? I am on ...
Bailey Johnston's user avatar
1 vote
1 answer
18k views

Zip2john issue on ubuntu 18.04 LTS [duplicate]

Problem: root@ITSASECRET:~/src/john/run# zip2john : command not found I want to add that the srcript is in the directory. I also had a lot of trouble installing Rexgen as well as Bison and ...
Red's user avatar
  • 21
1 vote
1 answer
130 views

iPython3 opened in Terminal - os.path.dir adds letter 'd' to path and triggers File not found error

Trying to iterate through a folder. I am working on ipython3, opened in Terminal. This is the code (in python 3.6.4): for filename in os.listdir('.'): for file in filename: with open(os....
gl3yn's user avatar
  • 113